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Tools for Identifying Biodiversity: Progress and Problems : [89]

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Devising the EDIT Platform for Cybertaxonomy

Walter G. Berendsohn


 Descriptive Data in the EDIT Platform for Cybertaxonomy

Maxime Venin, Agnes Kirchhoff, Hélène Fradin, Anton Güntsch, Niels Hoffmann,
Andreas Kohlbecker, Elise Kuntzelmann,Ôna Maiocco, Andreas Müller,
Régine Vignes Lebbe, Walter G. Berendsohn


An online authoring and publishing platform for field guides and identification tools

Gregor Hagedorn, Gisela Weber, Andreas Plank, Mircea Giurgiu, Andrei Homodi, Cornelia Veja, Gerd Schmidt,
Pencho Mihnev, Manol Roujinov, Dagmar Triebel, Robert A. Morris, Bernhard Zelazny, Edwin van Spronsen,
Peter Schalk, Christian Kittl, Robert Brandner, Stefano Martellos, Pier Luigi Nimis


A search tool for the digital biodiversity resources of KeyToNature

Mircea Giurgiu, Andrei Homodi, Cornelia Veja, Gregor Hagedorn, Pier Luigi Nimis


Developing Web-based Search Portals on Birds for Different Target Groups

Renate Steinmann, Andreas Strasser, Andrea Mulrenin, Amy Trayler, Sander Pieterse, Ivan Teage,
Michael De Giovanni, John J. Borg, Noel Zammit


Simple Identification Tools in FishBase

Nicolas Bailly, Rodolfo Reyes Jr., Rachel Atanacio, Rainer Froese


The Catalogue of Life: towards an integrative taxonomic backbone for biodiversity

Frank A. Bisby, Yuri R. Roskov


BHL-EUROPE: Biodiversity Heritage Library for Europe

Jana Hoffmann, Henning Scholz


A Pan-European Species-directories Infrastructure (PESI)

Yde de Jong 


ViBRANT–Virtual Biodiversity Research and Access Network for Taxonomy

Dave Roberts, Vince Smith


Identifications in BioPortals™

Wouter Addink, Edwin van Spronsen, Peter H. Schalk


Types of identification keys

Gregor Hagedorn, Gerhard Rambold, Stefano Martellos


Learning, Identifying, Sharing

Philippe A. Martin, Noël Conruyt, David Grosser


Identification with iterative nearest neighbors using domain knowledge

David Grosser, Noël Conruyt, Henri Ralambondrainy


A MediaWiki implementation of single-access keys

Gregor Hagedorn, Bob Press, Sonia Hetzner, Andreas Plank, Gisela Weber, Sabine von Mering,
Stefano Martellos, Pier Luigi Nimis


Simple matrix keys from Excel spreadsheets

Gregor Hagedorn, Mircea Giurgiu, Andrei Homodi


Wiki keys on mobile devices

Gisela Weber, Gregor Hagedorn

 A Wiki-based Key to Garden and Village Birds

Tomi Trilar

Wiki-keys for the ferns of the Flora of Equatorial Guinea

Francisco Cabezas, Carlos Aedo, Patricia Barberá, Manuel De la Estrella, Maximiliano Fero,
Mauricio Velayos


MyKey: a server-side software to create customized decision trees

David Gérard, Régine Vignes Lebbe


Xper²: managing descriptive data from their collection to e-monographs

Visotheary Ung, Florian Causse, Régine Vignes Lebbe


FRIDA 3.0 Multi-authored digital identification keys in the Web

Stefano Martellos


Flora Bellissima, an expert software to discover botany and identify plants

Thierry Pernot, Daniel Mathieu


Modifiable digital identification keys

Edwin van Spronsen, Stefano Martellos, Dennis Seijts, Peter Schalk, Pier Luigi Nimis


The Open Key Player: A new approach for online interaction and user-tracking in identification keys

Mircea Giurgiu, Andrei Homodi, Edwin van Spronsen, Stefano Martellos, Pier Luigi Nimis


mprovement of identification keys by user-tracking

Gerd Schmidt, Mircea Giurgiu, Sónia Hetzner, Fred Neumann


ARIES: an expert system supporting legislative tasks. Identifying animal materials using the Linnaeus II software

Leo W.D. van Raamsdonk


An integrated system for producing user-specific keys on demand: an application to Italian lichens

Juri Nascimbene, Stefano Martellos, Pier Luigi Nimis


“Flora Italiana Digitale”: an interactive identification tool for the Flora of Italy

Riccardo Guarino, Sabina Addamiano, Marco La Rosa,

Sandro Pignatti


eFlora and DialGraph, tools for enhancing identification processes in plants

Fernando Sánchez Laulhé, Cecilio Cano Calonge, Antonio Jiménez Montaño


A catalogue of bird bones: an exercise in semantic web practice

Gudmundur Gudmundsson, Seth D. Brewington, Thomas H. McGovern, Aevar Petersen 10 years showing Spanish plant diversity information in the Internet

Leopoldo Medina, Carlos Aedo


An interactive tool for the identification of airborne and food fungi

Giovanna Cristina Varese, Antonella Anastasi, Samuele Voyron, Valeria Filipello Marchisio


The Estonian eFlora

Tiina Randlane, Malle Leht, Andres Saag


Keys to plants and lichens on smartphones: Estonian examples

Andres Saag, Tiina Randlane, Malle Leht


IIKC: An Interactive Identification Key for female Culicoides (Diptera: Ceratopogonidae) from the West Palearctic region

Bruno Mathieu, Catherine Cêtre-Sossah, Claire Garros, David Chavernac, Thomas Balenghien, Régine Vignes Lebbe,
Visotheary Ung, Ermanno Candolfi, Jean-Claude Delécolle


Indochinese bamboos: biodiversity informatics to assist the identification

of “vernacular taxa”

My Hanh Diep Thi, Régine Vignes Lebbe, Ha Phuong Nguyen, Bich Loan Nguyen Thi


Identification tools as part of Feedsafety research: the case of ragwort

Leo W.D. van Raamsdonk, Patrick Mulder, Michel Uiterwijk


Two identification tools applied on Mascarene’s corals genera (Xper2) and species (IKBS)

Yannick Geynet, Noël Conruyt, David Grosser, Gérard Faure, David Caron


Interactive, illustrated, plant identification keys: an example for the Portuguese flora

Maria Helena Abreu Silva, Rosa Maria Ferreira Pinho, Lísia Graciete, Martins Pereira Lopes, Paulo Cardoso da Silveira


The ORCHIS software used to identify 100 orchids species of Lao PDR

Pierre Bonnet, André Schuiteman, Boukhaykhone Svengsuksa, Daniel Barthélémy, Vichith Lamxay,

Soulivanh Lanorsavanh, Khamfa Chanthavongsa, Pierre Grard


A collaborative and distributed identification tool for plants

Philippe Laroche


Alternative 2D and 3D Form Characterization Approaches to the Automated Identification of Biological Species

Norman MacLeod


VeSTIS: A Versatile Semi-Automatic Taxon Identification System from Digital Images

Nikos Nikolaou, Pantelis Sampaziotis, Marilena Aplikioti, Andreas Drakos, Ioannis Kirmitzoglou,
Marina Argyrou, Nikos Papamarkos, Vasilis J. Promponas


Iterative Search with Local Visual Features for Computer Assisted Plant Identification

Wajih Ouertani, Pierre Bonnet, Michel Crucianu, Nozha Boujemaa, Daniel Barthélémy


Image data banks and geometric morphometrics

Anna Loy, Dennis E. Slice


Outline analysis for identifying Limodorum species from seeds

Sara Magrini, Sergio Buono, Emanuele Gransinigh, Massimiliano Rempicci, Silvano Onofri, Anna Scoppola


Geometric morphometrics as a tool to resolve taxonomic problems: the case of Ophioglossum species (ferns)

Sara Magrini, Anna Scoppola


Geometric morphometric analysis as a tool to explore covariation between shape and other quantitative leaf traits in European white oaks

Vincenzo Viscosi, Anna Loy, Paola Fortini


Landmark based morphometric variation in Common dolphin (Delphinus delphis L.,1758)

Paola Nicolosi, Anna Loy


DNA barcoding: theoretical aspects and practical applications

Maurizio Casiraghi, Massimo Labra, Emanuele Ferri, Andrea Galimberti, Fabrizio De Mattia


Strength and Limitations of DNA Barcode under the Multidimensional Species Perspective

Valerio Sbordoni


DNA Barcoding and Phylogeny of Patellids from Asturias (Northern Spain)

Yaisel Juan Borrell, Fernando Romano, Emilia Vázquez, Gloria Blanco, Jose Antonio Sánchez Prado


Molecular Identification of Italian Mouse-eared Bats (genus Myotis)

Andrea Galimberti, Adriano Martinoli, Danilo Russo, Mauro Mucedda, Maurizio Casiraghi


Identifying algal symbionts in lichen symbioses

Martin Grube, Lucia Muggia


Identification of polymorphic species within groups of morphologically conservative taxa: combining morphological and molecular techniques

Kim Larsen, Elsa Froufe


Coffee species and varietal identification

Patrizia Tornincasa, Michela Furlan, Alberto Pallavicini, Giorgio Graziosi


Mislabelling in megrims: implications for conservation

Victor Crego-Prieto, Daniel Campo, Juliana Perez, Eva Garcia-Vazquez


Seeds in subtribe Orchidinae (Orchidaceae): the best morphological tool to support molecular analyses

Roberto Gamarra, Emma Ortúñez, Ernesto Sanz, Iris Esparza, Pablo Galán


Lentils biodiversity: the characterization of two local landraces

Vincenzo Viscosi, Manuela Ialicicco, Mariapina Rocco, Dalila Trupiano, Simona Arena,
Donato Chiatante, Andrea Scaloni, Gabriella Stefania Scippa


A model study for tardigrade identification

Roberto Bertolani, Lorena Rebecchi, Michele Cesari


DNA Barcoding of Philippine plants

Esperanza Maribel G. Agoo


Molecular and ecophysiological characterisation of the Tunisian bee: Apis mellifera intermissa

Mohamed Chouchene, Naima Barbouche, Lionel Garnery, Michel Baylac


Biological identifications through mitochondrial and nuclear molecular markers: the case of commercially important crabs from Indian EEZ

Sherine Sonia Cubelio, K. K. Bineesh, K. Raj, Suraj Tewari, Achamveettil Gopalakrishnan,

Valaparambil Saidumohammad Basheer, Wazir Singh Lakra


Barcoding Fauna Bavarica – Capturing Central European Animal Diversity

Lars Hendrich, Michael Balke, Gerhard Haszprunar, Axel Hausmann, Paul Hebert,

Stefan Schmidt


Molecular techniques for identifying North Sea fauna

Thomas Knebelsberger, Sandra Ditzler, Silke Laakmann, Inga Mohrbeck,

Michael J. Raupach


DNA Bank Network – connecting biological collections and sequence databases by long-term DNA storage with online accession

Matthias Geiger, Nicolas Straube


Mitochondrial DNA sequences for forensic identification of the endangered whale shark, Rhincodon typus (Smith, 1828): A Case study

Kavungal Abdulkhadar Sajeela, Chandran Rakhee, Janardanan Nair Rekha, Achamveettil Gopalakrishnan,
Valaparambil Saidumohammad Basheer, Joe Kizhakkudan Shoba, Kizhakkudan Joe, Wazir Singh Lakra


An assignment-based elearning course on the use of KeyToNature e-keys

Pencho Mihnev, Nadezhda Raycheva


User needs for interactive identification tools to organisms employed in the EU-Project KeyToNature

Astrid Tarkus, Emanuel Maxl, Christian Kittl


Teaching biodiversity with online identification tools from KeyToNature: a comparative study

Felicia Boar, Adelhaida Kerekes


Digital Tools in the Botanical Garden of Madrid

Marina Ferrer, Esther García


Use of KeyToNature Identification Tools in the Schools of Slovenia

Irena Kodele Krašna


New key-tools for pollen identification in research and education

Jade Dupont, Nathalie Combourieu Nebout, Jean-Pierre Cazet, Florian Causse, Régine Vignes Lebbe


The UK urban tree survey

Bob Press


Tree School – A new Innovation for Science and Education

Della Hopkins, Karen James


Engaging Schools in Cutting Edge Science: From the Educator’s Perspective

Adrian Richardson, Della Hopkins


Educational or emotional languages? An interactive experiment with the Lucanian flora (S-Italy)

Riccardo Guarino, Patrizia Menegoni, Sandro Pignatti


Online sharing educational content on biodiversity topics: a case study from organic agriculture and agroecology

Nikos Palavitsinis, Nikos Manouselis, Kostas Kastrantas, John Stoitsis, Xenofon Tsilibaris


JSTOR Plant Science

Michael Sean Gallagher


ecoBalade: Towards a workflow for Citizen Science Nature Trails

Julie Chabalier, Khaled Talbi, Patrick Peters, Amandine Sahl, Olivier Coullet, Olivier Assunçao, Olivier Rovellotti


Electronic data recording tools and identifying species in the field

Alexander Kroupa, Anke Hoffmann, Juan Carlos Monje, Christoph L. Häuser


Cost Assessment of the Field Measurement of Biodiversity: a Farm-scale Case Study

Stefano Targetti, Davide Viaggi, David Cuming


Markets for biodiversity information products: real or imaginary?

Bill Hominick, Peter Schalk


A Basic Business Model for Commercial Application of Identification Tools

Christian Kittl, Peter Schalk, Nicola Dorigo Salamon, Stefano Martellos


Keys to Nature: A test on the iPhone market

Rodolfo Riccamboni, Alessio Mereu, Chiara Boscarol


Author Index

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